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1

Predicting rice phenotypes with meta and multi-target learning

Orhobor, Oghenejokpeme I., Alexandrov, Nickolai N., King, Ross D.

Journal:

Machine Learning

Year:

2020

File:

PDF, 882 KB

2020

2

Progress in single-access information systems for wheat and rice crop improvement

Scheben, Armin, Chan, Chon-Kit Kenneth, Mansueto, Locedie, Mauleon, Ramil, Larmande, Pierre, Alexandrov, Nickolai, Wing, Rod A, McNally, Kenneth L, Quesneville, Hadi, Edwards, David

Journal:

Briefings in Bioinformatics

Year:

2018

Language:

english

File:

PDF, 224 KB

english, 2018

3

CGIAR modeling approaches for resource‐constrained scenarios: II. Accelerating crop breeding for a changing climate

Ramirez‐Villegas, Julian, Milan, Anabel Molero, Alexandrov, Nickolai, Asseng, Senthold, Challinor, Andrew J., Crossa, Jose, Eeuwijk, Fred, Ghanem, Michel Edmond, Grenier, Cecile, Heinemann, Alexandre

Journal:

Year:

2020

Language:

english

File:

PDF, 1.51 MB

english, 2020

4

Analysis of topological and nontopological structural similarities in the PDB: New examples with old structures

Nickolai N. Alexandrov, Daniel Fischer

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1996

Language:

english

File:

PDF, 1.23 MB

english, 1996

5

Structural argument for N-terminal initiation of protein folding

Nickolai Alexandrov

Journal:

Protein Science

Year:

1993

Language:

english

File:

PDF, 258 KB

english, 1993

6

Biological meaning, statistical significance, and classification of local spatial similarities in nonhomologous proteins

Nickolai N. Alexandrov, Nobuhiro Gō

Journal:

Protein Science

Year:

1994

Language:

english

File:

PDF, 6.97 MB

english, 1994

7

Alignment algorithm for homology modeling and threading

Nickolai N. Alexandrov, Roland Luethy

Journal:

Protein Science

Year:

1998

Language:

english

File:

PDF, 4.48 MB

english, 1998

8

Features ofArabidopsisGenes and Genome Discovered using Full-length cDNAs

Nickolai N. Alexandrov, Maxim E. Troukhan, Vyacheslav V. Brover, Tatiana Tatarinova, Richard B. Flavell, Kenneth A. Feldmann

Journal:

Plant Molecular Biology

Year:

2006

Language:

english

File:

PDF, 364 KB

english, 2006

9

Insights into corn genes derived from large-scale cDNA sequencing

Nickolai N. Alexandrov, Vyacheslav V. Brover, Stanislav Freidin, Maxim E. Troukhan, Tatiana V. Tatarinova, Hongyu Zhang, Timothy J. Swaller, Yu-Ping Lu, John Bouck, Richard B. Flavell, Kenneth A. Feld

Journal:

Plant Molecular Biology

Year:

2009

Language:

english

File:

PDF, 899 KB

english, 2009

10

Nucleotide binding in βαβ—βαβ topologies

Swindells, Mark G., Alexandrov, Nickolai N.

Journal:

Natural Structural Biology

Year:

1994

File:

PDF, 214 KB

1994

11

GC3biology in corn, rice, sorghum and other grasses

Tatiana V Tatarinova, Nickolai N Alexandrov, John B Bouck, Kenneth A Feldmann

Journal:

Year:

2010

Language:

english

File:

PDF, 1.05 MB

english, 2010

12

Common spatial arrangements of backbone fragments in homologous and non-homologous proteins

Nickolai N. Alexandrov, Katsutoshi Takahashi, Nobuhiro Gō

Journal:

Journal of Molecular Biology

Year:

1992

Language:

english

File:

PDF, 514 KB

english, 1992

13

Toward Consistent Assignment of Structural Domains in Proteins

Stella Veretnik, Philip E Bourne, Nickolai N Alexandrov, Ilya N Shindyalov

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 9.45 MB

english, 2004

14

A comparative proteomics resource: proteins ofArabidopsis thaliana

Wilfred W Li, Greg B Quinn, Nickolai N Alexandrov, Philip E Bourne…

Journal:

Year:

2003

Language:

english

File:

PDF, 234 KB

english, 2003

15

Genome-Scale Gene Function Prediction Using Multiple Sources of High-Throughput Data in Yeast Saccharomyces cerevisiae

Joshi, Trupti, Chen, Yu, Becker, Jeffrey M., Alexandrov, Nickolai, Xu, Dong

Journal:

Omics A Journal of Integrative Biology

Year:

2004

Language:

english

File:

PDF, 147 KB

english, 2004

16

SARFing the PDB

Alexandrov, Nickolai N.

Journal:

Protein Engineering Design and Selection

Year:

1996

Language:

english

File:

PDF, 6.54 MB

english, 1996

17

Application of a new method of pattern recognition in DNA sequence analysis: a study of E.coli promoters

Alexandrov, Nickolai N., Mironov, Andrei A.

Journal:

Nucleic Acids Research

Year:

1990

Language:

english

File:

PDF, 1.28 MB

english, 1990

18

Local multiple alignment by consensus matrix

Alexandrov, Nickolai N.

Journal:

Year:

1992

Language:

english

File:

PDF, 663 KB

english, 1992

19

Genome-Wide Discovery of cis -Elements in Promoter Sequences Using Gene Expression

Troukhan, Maxim, Tatarinova, Tatiana, Bouck, John, Flavell, Richard B., Alexandrov, Nickolai N.

Journal:

Omics A Journal of Integrative Biology

Year:

2009

Language:

english

File:

PDF, 501 KB

english, 2009

20

Cellular function prediction and biological pathway discovery in Arabidopsis thaliana using microarray data

Joshi, Trupti, Chen, Yu, Alexandrov, Nickolai N., Xu, Dong

Journal:

International Journal of Bioinformatics Research and Applications

Year:

2005

Language:

english

File:

PDF, 479 KB

english, 2005

21

Nucleotide diversity analysis highlights functionally important genomic regions

Tatarinova, Tatiana V., Chekalin, Evgeny, Nikolsky, Yuri, Bruskin, Sergey, Chebotarov, Dmitry, McNally, Kenneth L., Alexandrov, Nickolai

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.58 MB

english, 2016

22

Whole genome sequencing-based association study to unravel genetic architecture of cooked grain width and length traits in rice

Misra, Gopal, Badoni, Saurabh, Anacleto, Roslen, Graner, Andreas, Alexandrov, Nickolai, Sreenivasulu, Nese

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 5.81 MB

english, 2017

23

An imputation platform to enhance integration of rice genetic resources

Wang, Diane R., Agosto-Pérez, Francisco J., Chebotarov, Dmytro, Shi, Yuxin, Marchini, Jonathan, Fitzgerald, Melissa, McNally, Kenneth L., Alexandrov, Nickolai, McCouch, Susan R.

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.70 MB

english, 2018

24

Shared cis-regulatory architecture identified across defense response genes is associated with broad-spectrum quantitative resistance in rice

Tonnessen, Bradley W., Bossa-Castro, Ana M., Mauleon, Ramil, Alexandrov, Nickolai, Leach, Jan E.

Journal:

Scientific Reports

Year:

2019

File:

PDF, 2.81 MB

2019

25

Shared cis-regulatory architecture identified across defense response genes is associated with broad-spectrum quantitative resistance in rice

Tonnessen, Bradley W., Bossa-Castro, Ana M., Mauleon, Ramil, Alexandrov, Nickolai, Leach, Jan E.

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 2.81 MB

english, 2019

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